species:   Trrub
pid:       PID0875
parent:    Tru-novel-miRNA-8
paralog:   
locus:     JPGR01000008.1:333699-333863
matures:   ['AUCGGAGCGAUGCGAGACAUAGC', 'UGUGUAUGGAUGUAUCGUGAAGGUAA']
srr:       SRR7630467
genome:    /Users/jax/+Genomes/Fungal_genomes/Trrub.GCA_000812105.1_ASM81210v1_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Wang2018-by.SRR7630467.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Wang2018-by.SRR7630467.cram JPGR01000008.1:333699-333863

0 out of bounds
2 alignments
0 proper strand
0 stranded perfect matches

     ****************************                                                                                                       *************************    
GCUCUGCUGUGUAUGGAUGUAUCGUGAAGGUAAUAAGAGCUUAAGGGCAAGGAUGCGGUGAGCUGCCCGUUGAGAUGCGUGUGACGGUGAUUCUUCUGGGUGGCGGACGGUAAAAACAGCUAGACGUCUUUCUUUAUUAUCGGAGCGAUGCGAGACAUAGCAAGC
(((.((((((((.....((((((((...(((((((((((((((((((((.....((.....))))))).)))))...(((...)))((.((((....)))).))(((((...............)))))))).))))))))...))))))))..)))))))))))
------------------------------------------------------------------------------------------------------------------------------------------AUCGGAGCGAUGCGAGACAUAGC---- l=23 a=0 c
-------UGUGUAUGGAUGUAUCGUGAAGGUAA------------------------------------------------------------------------------------------------------------------------------------ l=26 a=0 c*
------------------------------------------------------------------------------------------------------------------------------------------AUCGGAGCGAUGCGAGACAUAGC---- l=23 a=0 ma
-------UGUGUAUGGAUGUAUCGUGAAGGUAA------------------------------------------------------------------------------------------------------------------------------------ l=26 a=0 ma*


No alignments to locus

mb-01011
ax-1001011
ku-01
ss-100111001100
fn-001
